The Dutch coach substituted the midfielder after just 28 minutes at San Siro on Sunday and criticized him after the game for continuing to make the same mistakes.
Geoffrey Kondogbia's Inter career is in crisis after coach Frank de Boer slammed his performance in the 1-1 draw against Bologna.
The French midfielder was caught in possession by Bologna's Saphir Taider after 14 minutes at San Siro, allowing the visiting side to open the scoring through Mattia Destro.
Ivan Perisic scored with a volley to level the match before halftime, but Kondogbia's part in the game lasted just 28 minutes and he was replaced by Assane Demoya Gnoukouri.