With one out, Andrew McCutchen on second base and the score tied in the ninth, Jung Ho Kang hit a hard line drive to Goldschmidt's left. He lunged and snagged the ball, spun and fired toward second base.
Shortstop Chris Owings was just approaching the bag when he caught the throw and tagged McCutchen, who was trying to get back to the bag.
McCutchen was initially called safe, but the D-backs challenged the play and it was overturned after review.
"He hits a line drive and you try to go catch it," said Goldschmidt, who won a Gold Glove in 2013.